Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LAMA5O15230 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
LAMA5O15230 MIR5100-201ENST00000579544 119 ntBASIC17.42■□□□□ 0.38
LAMA5O15230 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.42■□□□□ 0.38
LAMA5O15230 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LAMA5O15230 AC008556.1-201ENST00000610908 2040 ntBASIC17.41■□□□□ 0.38
LAMA5O15230 ZNF259P1-201ENST00000407656 1365 ntBASIC17.41■□□□□ 0.38
LAMA5O15230 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMA5O15230 AL591424.1-201ENST00000442569 1213 ntBASIC17.41■□□□□ 0.38
LAMA5O15230 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
LAMA5O15230 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMA5O15230 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.41■□□□□ 0.38
LAMA5O15230 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.41■□□□□ 0.38
LAMA5O15230 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.41■□□□□ 0.38
LAMA5O15230 SPCS2P1-201ENST00000561636 679 ntBASIC17.41■□□□□ 0.38
LAMA5O15230 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LAMA5O15230 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 AC244107.1-201ENST00000442033 332 ntBASIC17.4■□□□□ 0.38
LAMA5O15230 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.4■□□□□ 0.38
LAMA5O15230 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.4■□□□□ 0.38
LAMA5O15230 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LAMA5O15230 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.4■□□□□ 0.38
LAMA5O15230 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.4■□□□□ 0.38
LAMA5O15230 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 AC145285.3-201ENST00000564603 959 ntBASIC17.4■□□□□ 0.38
LAMA5O15230 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.4■□□□□ 0.38
LAMA5O15230 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.4■□□□□ 0.38
LAMA5O15230 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.4■□□□□ 0.38
LAMA5O15230 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.4■□□□□ 0.38
LAMA5O15230 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LAMA5O15230 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.4■□□□□ 0.38
LAMA5O15230 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
LAMA5O15230 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.39■□□□□ 0.38
LAMA5O15230 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.39■□□□□ 0.38
LAMA5O15230 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LAMA5O15230 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LAMA5O15230 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA5O15230 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.39■□□□□ 0.37
LAMA5O15230 AL596442.2-201ENST00000610240 980 ntBASIC17.39■□□□□ 0.37
LAMA5O15230 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
LAMA5O15230 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.39■□□□□ 0.37
LAMA5O15230 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LAMA5O15230 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.39■□□□□ 0.37
LAMA5O15230 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.39■□□□□ 0.37
LAMA5O15230 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA5O15230 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.39■□□□□ 0.37
LAMA5O15230 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LAMA5O15230 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.39■□□□□ 0.37
LAMA5O15230 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA5O15230 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.39■□□□□ 0.37
LAMA5O15230 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LAMA5O15230 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LAMA5O15230 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.38■□□□□ 0.37
LAMA5O15230 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
LAMA5O15230 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.38■□□□□ 0.37
LAMA5O15230 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.38■□□□□ 0.37
LAMA5O15230 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LAMA5O15230 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms