Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK1AO00322 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK1AO00322 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.84■□□□□ 0.45
UPK1AO00322 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UPK1AO00322 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UPK1AO00322 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.84■□□□□ 0.45
UPK1AO00322 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UPK1AO00322 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
UPK1AO00322 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK1AO00322 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.84■□□□□ 0.45
UPK1AO00322 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.84■□□□□ 0.45
UPK1AO00322 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.84■□□□□ 0.45
UPK1AO00322 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.84■□□□□ 0.45
UPK1AO00322 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UPK1AO00322 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UPK1AO00322 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
UPK1AO00322 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.83■□□□□ 0.45
UPK1AO00322 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPK1AO00322 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
UPK1AO00322 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
UPK1AO00322 UBE2SP1-201ENST00000450587 669 ntBASIC17.83■□□□□ 0.44
UPK1AO00322 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.83■□□□□ 0.44
UPK1AO00322 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.83■□□□□ 0.44
UPK1AO00322 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.83■□□□□ 0.44
UPK1AO00322 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.83■□□□□ 0.44
UPK1AO00322 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.83■□□□□ 0.44
UPK1AO00322 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 ANO7L1-203ENST00000602586 1720 ntBASIC17.83■□□□□ 0.44
UPK1AO00322 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UPK1AO00322 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
UPK1AO00322 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.83■□□□□ 0.44
UPK1AO00322 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.83■□□□□ 0.44
UPK1AO00322 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPK1AO00322 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UPK1AO00322 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UPK1AO00322 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 AL135905.2-201ENST00000584934 1404 ntBASIC17.82■□□□□ 0.44
UPK1AO00322 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.82■□□□□ 0.44
UPK1AO00322 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.82■□□□□ 0.44
UPK1AO00322 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UPK1AO00322 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
UPK1AO00322 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
UPK1AO00322 ABALON-201ENST00000629058 1903 ntBASIC17.82■□□□□ 0.44
UPK1AO00322 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPK1AO00322 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.82■□□□□ 0.44
UPK1AO00322 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.82■□□□□ 0.44
UPK1AO00322 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1AO00322 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UPK1AO00322 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms