Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 AC036111.1-201ENST00000533973 1582 ntBASIC14.82□□□□□ -0.04
LINC01548A6NM66 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.82□□□□□ -0.04
LINC01548A6NM66 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 AC141257.4-201ENST00000634557 245 ntBASIC14.82□□□□□ -0.04
LINC01548A6NM66 AC136944.6-201ENST00000634818 245 ntBASIC14.82□□□□□ -0.04
LINC01548A6NM66 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.82□□□□□ -0.04
LINC01548A6NM66 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01548A6NM66 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LINC01548A6NM66 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 MCCD1P1-208ENST00000445732 328 ntBASIC14.81□□□□□ -0.04
LINC01548A6NM66 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 AC139887.4-201ENST00000607877 719 ntBASIC14.81□□□□□ -0.04
LINC01548A6NM66 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 AC068587.9-201ENST00000641814 219 ntBASIC14.81□□□□□ -0.04
LINC01548A6NM66 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC01548A6NM66 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC01548A6NM66 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 AC009947.2-201ENST00000444014 672 ntBASIC14.8□□□□□ -0.04
LINC01548A6NM66 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 AC006011.2-201ENST00000621313 1158 ntBASIC14.8□□□□□ -0.04
LINC01548A6NM66 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC01548A6NM66 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LINC01548A6NM66 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms