Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 AC097488.1-201ENST00000507834 756 ntBASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV2A0A0B4J234 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 AL161938.1-201ENST00000569833 2180 ntBASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 MFAP1P1-201ENST00000442257 1255 ntBASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SNORA78-201ENST00000459373 127 ntBASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SLC25A1P4-201ENST00000567977 778 ntBASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV2A0A0B4J234 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 AC098818.2-201ENST00000564925 2320 ntBASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms