Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SLC25A1P2-201ENST00000430693 912 ntBASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 EGLN1P1-201ENST00000531623 762 ntBASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AL512353.2-201ENST00000448759 1962 ntBASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 KRT8P32-201ENST00000512863 1461 ntBASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TNXA-203ENST00000507684 2038 ntBASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SLC25A3P1-201ENST00000443844 931 ntBASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC087289.5-201ENST00000586076 3175 ntBASIC17.1■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TERF1P1-201ENST00000311003 1181 ntBASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC008622.2-201ENST00000617006 1229 ntBASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC120498.9-201ENST00000339021 3867 ntBASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.08■□□□□ 0.33
TNFSF12-TNFSF13A0A0A6YY99 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 AC073508.3-201ENST00000619697 1419 ntBASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 CCR12P-201ENST00000446203 998 ntBASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 TSPY17P-201ENST00000450329 467 ntBASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TNFSF12-TNFSF13A0A0A6YY99 AL023803.3-201ENST00000615559 522 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms