Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 FP475955.4-201ENST00000623131 1990 ntBASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 KRT18P41-201ENST00000518924 1277 ntBASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BIVM-ERCC5R4GMW8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 FEM1AP3-201ENST00000403722 1741 ntBASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 Z98044.1-201ENST00000632503 1764 ntBASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 RN7SL606P-201ENST00000472779 293 ntBASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC31.33■■■□□ 2.61
BIVM-ERCC5R4GMW8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
BIVM-ERCC5R4GMW8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 AL353801.3-201ENST00000609898 542 ntBASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 AC141586.3-201ENST00000562166 1838 ntBASIC31.32■■■□□ 2.6
BIVM-ERCC5R4GMW8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 AC024563.2-201ENST00000603282 481 ntBASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 HLA-A-201ENST00000376802 1334 ntBASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC31.31■■■□□ 2.6
BIVM-ERCC5R4GMW8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 AC091304.2-201ENST00000564639 760 ntBASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 BNIP3P18-201ENST00000593976 575 ntBASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
BIVM-ERCC5R4GMW8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 FICD-205ENST00000552758 603 ntTSL 2 BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 AC120114.3-201ENST00000611923 658 ntBASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 HEIH-201ENST00000623091 1652 ntBASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC31.29■■■□□ 2.6
BIVM-ERCC5R4GMW8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC31.28■■■□□ 2.6
BIVM-ERCC5R4GMW8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC31.28■■■□□ 2.6
BIVM-ERCC5R4GMW8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
BIVM-ERCC5R4GMW8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
BIVM-ERCC5R4GMW8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms