Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 CKBP1-201ENST00000565489 1086 ntBASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 AL512604.3-201ENST00000569583 964 ntBASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 AC010653.2-201ENST00000623505 997 ntBASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 AL358472.4-201ENST00000633140 710 ntBASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHB11Q9Y5F2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 AC093503.3-201ENST00000624917 2352 ntBASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 AC117947.1-201ENST00000427448 529 ntBASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHB11Q9Y5F2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 INGX-201ENST00000359239 846 ntBASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 TSPY17P-201ENST00000450329 467 ntBASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 COX11P1-201ENST00000489116 835 ntBASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 AC139887.4-201ENST00000607877 719 ntBASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB11Q9Y5F2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms