Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AL671277.2-201ENST00000458060 996 ntBASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AC024243.1-201ENST00000609234 778 ntBASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 AL109659.2-201ENST00000606809 1674 ntBASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00588Q9Y4M8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 AC008556.1-201ENST00000610908 2040 ntBASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 STARP1-201ENST00000397973 869 ntBASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 AC112907.2-201ENST00000448639 330 ntBASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00588Q9Y4M8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 SPDYE15P-201ENST00000424157 909 ntBASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 AL121956.5-201ENST00000625261 221 ntBASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 AL358472.4-201ENST00000633140 710 ntBASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00588Q9Y4M8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms