Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 AC093525.10-201ENST00000625130 1569 ntBASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRAK1Q9UPV9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 KRT8P26-201ENST00000534154 1276 ntBASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 MIR3652-201ENST00000579335 131 ntBASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 HOXB1-202ENST00000577092 1414 ntBASIC26.31■■□□□ 1.8
TRAK1Q9UPV9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
TRAK1Q9UPV9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 AC141586.3-201ENST00000562166 1838 ntBASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAK1Q9UPV9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 TSPY22P-201ENST00000427496 604 ntBASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRAK1Q9UPV9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 PRELID1P1-202ENST00000567272 903 ntBASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 KRT8P7-201ENST00000533003 1432 ntBASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 FP475955.4-201ENST00000623131 1990 ntBASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAK1Q9UPV9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRAK1Q9UPV9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms