Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 DNAJB3-201ENST00000446806 729 ntBASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 KRT18P3-201ENST00000451602 1288 ntBASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL17A1Q9UMD9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 AC244107.1-201ENST00000442033 332 ntBASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 AC012640.2-201ENST00000561606 901 ntBASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 AC040169.1-201ENST00000565382 521 ntBASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL17A1Q9UMD9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 FAM8A3P-201ENST00000427218 844 ntBASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 AP001269.4-201ENST00000609611 512 ntBASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 AC104417.2-201ENST00000562989 1793 ntBASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
COL17A1Q9UMD9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 Z83851.2-201ENST00000609564 659 ntBASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 AC006128.1-201ENST00000624704 1661 ntBASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 COA5-202ENST00000409997 557 ntTSL 4 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 AC096582.2-201ENST00000510860 516 ntBASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
COL17A1Q9UMD9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC28.45■■■□□ 2.15
COL17A1Q9UMD9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
COL17A1Q9UMD9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
COL17A1Q9UMD9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 MIR3687-2-201ENST00000577708 61 ntBASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 MIR3687-1-201ENST00000614492 61 ntBASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.45■■■□□ 2.14
COL17A1Q9UMD9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC28.44■■■□□ 2.14
COL17A1Q9UMD9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 AC009533.2-201ENST00000543664 586 ntBASIC28.43■■■□□ 2.14
COL17A1Q9UMD9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms