Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DNMT3BQ9UBC3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 KRT8P26-201ENST00000534154 1276 ntBASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 PRELID1P1-202ENST00000567272 903 ntBASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DNMT3BQ9UBC3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 RCC2P3-201ENST00000418112 1537 ntBASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 AC008556.1-201ENST00000610908 2040 ntBASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 AL512353.2-201ENST00000448759 1962 ntBASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 MIR662-201ENST00000384847 95 ntBASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 AL109659.2-201ENST00000606809 1674 ntBASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.61■□□□□ 0.73
DNMT3BQ9UBC3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 AP002414.4-201ENST00000589764 1148 ntBASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 AC093525.10-201ENST00000625130 1569 ntBASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DNMT3BQ9UBC3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 KRT18P23-201ENST00000435622 1283 ntBASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 AL158211.5-201ENST00000623583 2518 ntBASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DNMT3BQ9UBC3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms