Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 AC124283.5-201ENST00000624661 1809 ntBASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 AC006333.2-201ENST00000607957 2099 ntBASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB16Q9NRJ7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 CROCCP3-202ENST00000420820 1947 ntBASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 AC142086.2-201ENST00000569753 217 ntBASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 Z98044.1-201ENST00000632503 1764 ntBASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB16Q9NRJ7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 FEM1AP3-201ENST00000403722 1741 ntBASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 HLA-L-209ENST00000420110 1011 ntBASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 PRKY-204ENST00000533551 1019 ntBASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB16Q9NRJ7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHB16Q9NRJ7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PCDHB16Q9NRJ7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB16Q9NRJ7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms