Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.53■□□□□ 0.4
CTPS2Q9NRF8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 AC005082.1-201ENST00000413042 2259 ntBASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTPS2Q9NRF8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTPS2Q9NRF8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 HTR7P1-201ENST00000538670 1336 ntBASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 AL158047.1-201ENST00000445918 881 ntBASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTPS2Q9NRF8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 GCSHP5-201ENST00000443090 522 ntBASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 AL160286.2-201ENST00000567150 934 ntBASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 Z98044.1-201ENST00000632503 1764 ntBASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTPS2Q9NRF8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms