Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AC091874.3-201ENST00000512672 1195 ntBASIC18.69■□□□□ 0.58
SSU72Q9NP77 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AC092118.2-201ENST00000613495 667 ntBASIC18.69■□□□□ 0.58
SSU72Q9NP77 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 AL050303.2-201ENST00000619798 666 ntBASIC18.69■□□□□ 0.58
SSU72Q9NP77 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 HLA-A-209ENST00000638375 975 ntBASIC18.69■□□□□ 0.58
SSU72Q9NP77 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SSU72Q9NP77 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSU72Q9NP77 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 AC092368.3-202ENST00000574180 1591 ntBASIC18.68■□□□□ 0.58
SSU72Q9NP77 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSU72Q9NP77 MIPEPP3-201ENST00000412105 444 ntBASIC18.68■□□□□ 0.58
SSU72Q9NP77 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSU72Q9NP77 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.68■□□□□ 0.58
SSU72Q9NP77 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSU72Q9NP77 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 KRT8P41-201ENST00000533985 1514 ntBASIC18.68■□□□□ 0.58
SSU72Q9NP77 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSU72Q9NP77 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSU72Q9NP77 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.68■□□□□ 0.58
SSU72Q9NP77 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SSU72Q9NP77 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSU72Q9NP77 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms