Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18■□□□□ 0.47
BRF2Q9HAW0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18■□□□□ 0.47
BRF2Q9HAW0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BRF2Q9HAW0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18■□□□□ 0.47
BRF2Q9HAW0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18■□□□□ 0.47
BRF2Q9HAW0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18■□□□□ 0.47
BRF2Q9HAW0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
BRF2Q9HAW0 MYC-208ENST00000641036 567 ntBASIC18■□□□□ 0.47
BRF2Q9HAW0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
BRF2Q9HAW0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BRF2Q9HAW0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 AL049637.2-201ENST00000641778 930 ntBASIC17.99■□□□□ 0.47
BRF2Q9HAW0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.99■□□□□ 0.47
BRF2Q9HAW0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 AC104581.1-202ENST00000635932 2618 ntBASIC17.98■□□□□ 0.47
BRF2Q9HAW0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 AC113410.3-201ENST00000623366 203 ntBASIC17.98■□□□□ 0.47
BRF2Q9HAW0 AC079598.2-202ENST00000546624 1451 ntBASIC17.98■□□□□ 0.47
BRF2Q9HAW0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 RCC2P3-201ENST00000418112 1537 ntBASIC17.98■□□□□ 0.47
BRF2Q9HAW0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRF2Q9HAW0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRF2Q9HAW0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms