Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.42■□□□□ 0.86
NUCKS1Q9H1E3 AL354751.1-201ENST00000412768 1863 ntBASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 AC008550.1-201ENST00000511500 884 ntBASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 AP006294.2-201ENST00000641667 209 ntBASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 HEIH-201ENST00000623091 1652 ntBASIC20.41■□□□□ 0.86
NUCKS1Q9H1E3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUCKS1Q9H1E3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUCKS1Q9H1E3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NUCKS1Q9H1E3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 RCC2P6-201ENST00000526625 1557 ntBASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 KRT16P5-201ENST00000455284 522 ntBASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUCKS1Q9H1E3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms