Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 MTMR9LP-203ENST00000426597 1545 ntBASIC19.75■□□□□ 0.75
SMOQ99835 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMOQ99835 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMOQ99835 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.75■□□□□ 0.75
SMOQ99835 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.75■□□□□ 0.75
SMOQ99835 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.74■□□□□ 0.75
SMOQ99835 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.74■□□□□ 0.75
SMOQ99835 GCSHP2-201ENST00000560971 527 ntBASIC19.74■□□□□ 0.75
SMOQ99835 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.74■□□□□ 0.75
SMOQ99835 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.74■□□□□ 0.75
SMOQ99835 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMOQ99835 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMOQ99835 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMOQ99835 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMOQ99835 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMOQ99835 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.73■□□□□ 0.75
SMOQ99835 AC006333.2-201ENST00000607957 2099 ntBASIC19.73■□□□□ 0.75
SMOQ99835 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.73■□□□□ 0.75
SMOQ99835 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.73■□□□□ 0.75
SMOQ99835 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.73■□□□□ 0.75
SMOQ99835 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMOQ99835 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.73■□□□□ 0.75
SMOQ99835 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMOQ99835 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.73■□□□□ 0.75
SMOQ99835 AC022616.7-201ENST00000525383 220 ntBASIC19.73■□□□□ 0.75
SMOQ99835 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.73■□□□□ 0.75
SMOQ99835 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.73■□□□□ 0.75
SMOQ99835 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.73■□□□□ 0.75
SMOQ99835 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMOQ99835 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMOQ99835 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
SMOQ99835 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMOQ99835 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.72■□□□□ 0.75
SMOQ99835 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SMOQ99835 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMOQ99835 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMOQ99835 AP000523.1-201ENST00000398242 1049 ntBASIC19.72■□□□□ 0.75
SMOQ99835 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.72■□□□□ 0.75
SMOQ99835 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.72■□□□□ 0.75
SMOQ99835 KRT18P35-201ENST00000510488 1269 ntBASIC19.72■□□□□ 0.75
SMOQ99835 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.72■□□□□ 0.75
SMOQ99835 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.72■□□□□ 0.75
SMOQ99835 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SMOQ99835 NTF6B-201ENST00000591913 560 ntBASIC19.72■□□□□ 0.75
SMOQ99835 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 AL445228.2-201ENST00000605589 952 ntBASIC19.72■□□□□ 0.75
SMOQ99835 AL590326.2-201ENST00000625139 305 ntBASIC19.72■□□□□ 0.75
SMOQ99835 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMOQ99835 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMOQ99835 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.72■□□□□ 0.75
SMOQ99835 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.72■□□□□ 0.75
SMOQ99835 AL357033.4-201ENST00000617703 1807 ntBASIC19.72■□□□□ 0.75
SMOQ99835 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.71■□□□□ 0.75
SMOQ99835 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 FAM8A6P-201ENST00000407496 1135 ntBASIC19.71■□□□□ 0.75
SMOQ99835 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.71■□□□□ 0.75
SMOQ99835 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.71■□□□□ 0.75
SMOQ99835 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMOQ99835 AC024243.1-201ENST00000609234 778 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms