Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 AC004980.1-204ENST00000429707 299 ntBASIC18.86■□□□□ 0.61
NDNQ99608 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.86■□□□□ 0.61
NDNQ99608 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NDNQ99608 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.86■□□□□ 0.61
NDNQ99608 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDNQ99608 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NDNQ99608 AC009113.1-201ENST00000570267 2443 ntBASIC18.85■□□□□ 0.61
NDNQ99608 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.85■□□□□ 0.61
NDNQ99608 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 FAM201B-201ENST00000458407 597 ntBASIC18.85■□□□□ 0.61
NDNQ99608 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.85■□□□□ 0.61
NDNQ99608 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.85■□□□□ 0.61
NDNQ99608 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 Z98044.1-201ENST00000632503 1764 ntBASIC18.85■□□□□ 0.61
NDNQ99608 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDNQ99608 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.85■□□□□ 0.61
NDNQ99608 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
NDNQ99608 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.85■□□□□ 0.61
NDNQ99608 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.84■□□□□ 0.61
NDNQ99608 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.84■□□□□ 0.61
NDNQ99608 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.84■□□□□ 0.61
NDNQ99608 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.84■□□□□ 0.61
NDNQ99608 AC131212.4-201ENST00000623606 975 ntBASIC18.84■□□□□ 0.61
NDNQ99608 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.84■□□□□ 0.61
NDNQ99608 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.84■□□□□ 0.61
NDNQ99608 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.84■□□□□ 0.61
NDNQ99608 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NDNQ99608 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NDNQ99608 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDNQ99608 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDNQ99608 KRT8P11-201ENST00000409686 1436 ntBASIC18.83■□□□□ 0.61
NDNQ99608 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
NDNQ99608 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDNQ99608 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDNQ99608 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NDNQ99608 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.83■□□□□ 0.61
NDNQ99608 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.83■□□□□ 0.61
NDNQ99608 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 AL359736.2-201ENST00000621992 437 ntBASIC18.83■□□□□ 0.6
NDNQ99608 AC083906.6-201ENST00000641366 219 ntBASIC18.83■□□□□ 0.6
NDNQ99608 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NDNQ99608 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDNQ99608 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NDNQ99608 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms