Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
S1PR3Q99500 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.55■□□□□ 0.08
S1PR3Q99500 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
S1PR3Q99500 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
S1PR3Q99500 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 Z98044.1-201ENST00000632503 1764 ntBASIC15.54■□□□□ 0.08
S1PR3Q99500 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.54■□□□□ 0.08
S1PR3Q99500 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
S1PR3Q99500 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AL353807.1-201ENST00000427475 662 ntBASIC15.54■□□□□ 0.08
S1PR3Q99500 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.54■□□□□ 0.08
S1PR3Q99500 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.54■□□□□ 0.08
S1PR3Q99500 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.54■□□□□ 0.08
S1PR3Q99500 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.54■□□□□ 0.08
S1PR3Q99500 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.54■□□□□ 0.08
S1PR3Q99500 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.54■□□□□ 0.08
S1PR3Q99500 AL445675.2-201ENST00000620291 557 ntBASIC15.54■□□□□ 0.08
S1PR3Q99500 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
S1PR3Q99500 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
S1PR3Q99500 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
S1PR3Q99500 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR3Q99500 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.53■□□□□ 0.08
S1PR3Q99500 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
S1PR3Q99500 UBE2SP1-201ENST00000450587 669 ntBASIC15.53■□□□□ 0.08
S1PR3Q99500 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR3Q99500 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.53■□□□□ 0.08
S1PR3Q99500 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR3Q99500 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
S1PR3Q99500 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR3Q99500 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR3Q99500 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR3Q99500 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.53■□□□□ 0.08
S1PR3Q99500 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR3Q99500 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR3Q99500 AC093525.10-201ENST00000625130 1569 ntBASIC15.53■□□□□ 0.08
S1PR3Q99500 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.53■□□□□ 0.08
S1PR3Q99500 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.53■□□□□ 0.08
S1PR3Q99500 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
S1PR3Q99500 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR3Q99500 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR3Q99500 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
S1PR3Q99500 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.52■□□□□ 0.08
S1PR3Q99500 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.52■□□□□ 0.08
S1PR3Q99500 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR3Q99500 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.52■□□□□ 0.08
S1PR3Q99500 NIFKP9-201ENST00000419265 221 ntBASIC15.52■□□□□ 0.08
S1PR3Q99500 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
S1PR3Q99500 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
S1PR3Q99500 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.52■□□□□ 0.08
S1PR3Q99500 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms