Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCC1Q96S66 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLCC1Q96S66 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 AC069152.1-201ENST00000438030 544 ntBASIC15.82■□□□□ 0.12
CLCC1Q96S66 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 PHGDH-210ENST00000641115 1638 ntBASIC15.82■□□□□ 0.12
CLCC1Q96S66 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCC1Q96S66 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLCC1Q96S66 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 ID1-201ENST00000376105 1233 ntBASIC15.81■□□□□ 0.12
CLCC1Q96S66 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 NOC2LP2-201ENST00000407594 1944 ntBASIC15.81■□□□□ 0.12
CLCC1Q96S66 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 AC005829.2-201ENST00000571422 1056 ntBASIC15.81■□□□□ 0.12
CLCC1Q96S66 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLCC1Q96S66 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLCC1Q96S66 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms