Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DUX3Q96PT4 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.64□□□□□ -0.07
DUX3Q96PT4 YBX1P2-201ENST00000489612 999 ntBASIC14.64□□□□□ -0.07
DUX3Q96PT4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DUX3Q96PT4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DUX3Q96PT4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DUX3Q96PT4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DUX3Q96PT4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
DUX3Q96PT4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.64□□□□□ -0.07
DUX3Q96PT4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.63□□□□□ -0.07
DUX3Q96PT4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 CA15P1-201ENST00000481698 905 ntBASIC14.63□□□□□ -0.07
DUX3Q96PT4 COX11P1-201ENST00000489116 835 ntBASIC14.63□□□□□ -0.07
DUX3Q96PT4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 AC022616.7-201ENST00000525383 220 ntBASIC14.63□□□□□ -0.07
DUX3Q96PT4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.63□□□□□ -0.07
DUX3Q96PT4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DUX3Q96PT4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.63□□□□□ -0.07
DUX3Q96PT4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 AC007952.6-201ENST00000573168 2673 ntBASIC14.62□□□□□ -0.07
DUX3Q96PT4 AC003957.1-201ENST00000625108 2673 ntBASIC14.62□□□□□ -0.07
DUX3Q96PT4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 AC092647.4-201ENST00000457211 535 ntBASIC14.62□□□□□ -0.07
DUX3Q96PT4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 AC011558.1-201ENST00000623459 338 ntBASIC14.62□□□□□ -0.07
DUX3Q96PT4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DUX3Q96PT4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
DUX3Q96PT4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms