Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF48Q96MX3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 SPDYE15P-201ENST00000424157 909 ntBASIC15.3■□□□□ 0.04
ZNF48Q96MX3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 HYMAI.1-201ENST00000620949 238 ntBASIC15.3■□□□□ 0.04
ZNF48Q96MX3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF48Q96MX3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 SDHAP1-207ENST00000440850 2000 ntBASIC15.29■□□□□ 0.04
ZNF48Q96MX3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 VENTXP5-201ENST00000523979 775 ntBASIC15.29■□□□□ 0.04
ZNF48Q96MX3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 CR769767.2-201ENST00000622735 460 ntBASIC15.29■□□□□ 0.04
ZNF48Q96MX3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF48Q96MX3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 AC018445.3-201ENST00000624177 1945 ntBASIC15.28■□□□□ 0.04
ZNF48Q96MX3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 STARP1-201ENST00000397973 869 ntBASIC15.28■□□□□ 0.04
ZNF48Q96MX3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 ZNF444P1-201ENST00000559497 298 ntBASIC15.28■□□□□ 0.04
ZNF48Q96MX3 AL136038.3-201ENST00000561909 1096 ntBASIC15.28■□□□□ 0.04
ZNF48Q96MX3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF48Q96MX3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms