Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.82■□□□□ 0.12
TIMD4Q96H15 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.81■□□□□ 0.12
TIMD4Q96H15 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 NTF6B-201ENST00000591913 560 ntBASIC15.81■□□□□ 0.12
TIMD4Q96H15 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 OR6D1P-202ENST00000641007 5290 ntBASIC15.81■□□□□ 0.12
TIMD4Q96H15 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TIMD4Q96H15 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMD4Q96H15 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 FEM1AP3-201ENST00000403722 1741 ntBASIC15.8■□□□□ 0.12
TIMD4Q96H15 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 WWOX-216ENST00000569818 525 ntBASIC15.8■□□□□ 0.12
TIMD4Q96H15 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 AL023973.1-201ENST00000624619 620 ntBASIC15.8■□□□□ 0.12
TIMD4Q96H15 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TIMD4Q96H15 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TIMD4Q96H15 TEX21P-204ENST00000641479 1693 ntBASIC15.79■□□□□ 0.12
TIMD4Q96H15 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMD4Q96H15 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TIMD4Q96H15 SLC25A24-204ENST00000569674 2357 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms