Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 AL031133.1-201ENST00000406807 723 ntBASIC18.13■□□□□ 0.49
RNF31Q96EP0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 TSPY17P-201ENST00000450329 467 ntBASIC18.13■□□□□ 0.49
RNF31Q96EP0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 AC093458.2-201ENST00000623150 629 ntBASIC18.13■□□□□ 0.49
RNF31Q96EP0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 AC120498.9-201ENST00000339021 3867 ntBASIC18.13■□□□□ 0.49
RNF31Q96EP0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF31Q96EP0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RNF31Q96EP0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 AC009947.2-201ENST00000444014 672 ntBASIC18.12■□□□□ 0.49
RNF31Q96EP0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 AC140113.3-201ENST00000605663 199 ntBASIC18.12■□□□□ 0.49
RNF31Q96EP0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF31Q96EP0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF31Q96EP0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 AC010653.2-201ENST00000623505 997 ntBASIC18.11■□□□□ 0.49
RNF31Q96EP0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF31Q96EP0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF31Q96EP0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF31Q96EP0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms