Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.39■□□□□ 0.53
ATL1Q8WXF7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 AC096733.2-201ENST00000609937 1394 ntBASIC18.39■□□□□ 0.53
ATL1Q8WXF7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 CROCCP3-202ENST00000420820 1947 ntBASIC18.39■□□□□ 0.53
ATL1Q8WXF7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATL1Q8WXF7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 MIR4785-201ENST00000585005 73 ntBASIC18.38■□□□□ 0.53
ATL1Q8WXF7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 AC093503.3-201ENST00000624917 2352 ntBASIC18.38■□□□□ 0.53
ATL1Q8WXF7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATL1Q8WXF7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 Z98044.1-201ENST00000632503 1764 ntBASIC18.37■□□□□ 0.53
ATL1Q8WXF7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.37■□□□□ 0.53
ATL1Q8WXF7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.37■□□□□ 0.53
ATL1Q8WXF7 REXO1L12P-201ENST00000622156 912 ntBASIC18.37■□□□□ 0.53
ATL1Q8WXF7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATL1Q8WXF7 AC004408.2-201ENST00000623613 2777 ntBASIC18.36■□□□□ 0.53
ATL1Q8WXF7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AC097488.1-201ENST00000507834 756 ntBASIC18.36■□□□□ 0.53
ATL1Q8WXF7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AP003071.4-201ENST00000562276 1284 ntBASIC18.36■□□□□ 0.53
ATL1Q8WXF7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATL1Q8WXF7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATL1Q8WXF7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms