Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RTN4IP1Q8WWV3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN4IP1Q8WWV3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN4IP1Q8WWV3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RTN4IP1Q8WWV3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RTN4IP1Q8WWV3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RTN4IP1Q8WWV3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms