Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SH3RF2Q8TEC5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.52■□□□□ 0.71
SH3RF2Q8TEC5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH3RF2Q8TEC5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH3RF2Q8TEC5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.52■□□□□ 0.71
SH3RF2Q8TEC5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 AC093458.2-201ENST00000623150 629 ntBASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH3RF2Q8TEC5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 RASA4DP-201ENST00000460726 1199 ntBASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SH3RF2Q8TEC5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 AC034232.1-201ENST00000506026 1064 ntBASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SH3RF2Q8TEC5 AC087289.5-201ENST00000586076 3175 ntBASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.48■□□□□ 0.71
SH3RF2Q8TEC5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.47■□□□□ 0.71
SH3RF2Q8TEC5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms