Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MFAP1P1-201ENST00000442257 1255 ntBASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 AC097488.1-201ENST00000507834 756 ntBASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 AP003071.4-201ENST00000562276 1284 ntBASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH19Q8TAB3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 AL355075.4-201ENST00000554988 638 ntBASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 AC008622.2-201ENST00000617006 1229 ntBASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH19Q8TAB3 AC005082.1-201ENST00000413042 2259 ntBASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 NEFHP1-201ENST00000412845 2629 ntBASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH19Q8TAB3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 RCC2P3-201ENST00000418112 1537 ntBASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms