Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 MIR1238-201ENST00000408483 83 ntBASIC16.47■□□□□ 0.23
CPEB3Q8NE35 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPEB3Q8NE35 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 KRT8P3-201ENST00000519669 1449 ntBASIC16.46■□□□□ 0.23
CPEB3Q8NE35 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.46■□□□□ 0.23
CPEB3Q8NE35 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPEB3Q8NE35 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CPEB3Q8NE35 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CPEB3Q8NE35 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CPEB3Q8NE35 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 CROCCP3-202ENST00000420820 1947 ntBASIC16.45■□□□□ 0.22
CPEB3Q8NE35 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.45■□□□□ 0.22
CPEB3Q8NE35 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPEB3Q8NE35 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPEB3Q8NE35 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPEB3Q8NE35 AC004408.2-201ENST00000623613 2777 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms