Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 AC091304.2-201ENST00000564639 760 ntBASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 AC138894.3-201ENST00000603787 634 ntBASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 NME4-212ENST00000621774 904 ntTSL 3 BASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 TP73-AS1-207ENST00000624167 988 ntBASIC29.44■■■□□ 2.3
CFAP43Q8NDM7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 KATNBL1P6-202ENST00000562413 1466 ntBASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 AL136038.4-201ENST00000603606 1261 ntBASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CFAP43Q8NDM7 AC141586.3-201ENST00000562166 1838 ntBASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 AC079776.4-201ENST00000511039 504 ntBASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CFAP43Q8NDM7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 AC104819.1-201ENST00000504587 486 ntBASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 AC074051.2-201ENST00000565115 352 ntBASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 RNF126P1-202ENST00000569893 925 ntBASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC29.41■■■□□ 2.3
CFAP43Q8NDM7 MIR574-201ENST00000385209 96 ntBASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 RCC2P3-201ENST00000418112 1537 ntBASIC29.4■■■□□ 2.3
CFAP43Q8NDM7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 IRX1P1-201ENST00000438849 1838 ntBASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 AL157888.1-201ENST00000631930 593 ntBASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC29.39■■■□□ 2.3
CFAP43Q8NDM7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.29
CFAP43Q8NDM7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 MIR662-201ENST00000384847 95 ntBASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 UBQLN4P1-201ENST00000461599 1801 ntBASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC29.38■■■□□ 2.29
CFAP43Q8NDM7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CFAP43Q8NDM7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC29.37■■■□□ 2.29
CFAP43Q8NDM7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms