Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.68■□□□□ 0.58
EFCAB3Q8N7B9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 AC090164.3-201ENST00000610780 2143 ntBASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFCAB3Q8N7B9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 AC087499.1-201ENST00000418141 1075 ntBASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFCAB3Q8N7B9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 FP475955.4-201ENST00000623131 1990 ntBASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms