Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH20Q8N6Y1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 KRT8P3-201ENST00000519669 1449 ntBASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH20Q8N6Y1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 AL032819.2-201ENST00000624543 2162 ntBASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH20Q8N6Y1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH20Q8N6Y1 IRX1P1-201ENST00000438849 1838 ntBASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms