Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TTC9CQ8N5M4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 MIR718-201ENST00000390190 70 ntBASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 DGCR10-201ENST00000609839 495 ntBASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 AL138781.2-201ENST00000617896 1843 ntBASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 BCL2-203ENST00000589955 5011 ntBASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.89□□□□□ -0.03
TTC9CQ8N5M4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 AL031598.1-201ENST00000561511 1773 ntBASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TTC9CQ8N5M4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AL355355.2-201ENST00000442321 338 ntBASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 Z99916.2-201ENST00000604037 246 ntBASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AP006294.2-201ENST00000641667 209 ntBASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TTC9CQ8N5M4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms