Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
WDR49Q8IV35 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
WDR49Q8IV35 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.25■□□□□ 0.83
WDR49Q8IV35 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
WDR49Q8IV35 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
WDR49Q8IV35 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
WDR49Q8IV35 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
WDR49Q8IV35 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.25■□□□□ 0.83
WDR49Q8IV35 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 AC005521.1-201ENST00000393351 872 ntBASIC20.24■□□□□ 0.83
WDR49Q8IV35 LIN28AP1-201ENST00000429574 405 ntBASIC20.24■□□□□ 0.83
WDR49Q8IV35 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 AL138966.2-201ENST00000621997 464 ntBASIC20.24■□□□□ 0.83
WDR49Q8IV35 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.24■□□□□ 0.83
WDR49Q8IV35 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 AC073508.3-201ENST00000619697 1419 ntBASIC20.24■□□□□ 0.83
WDR49Q8IV35 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
WDR49Q8IV35 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 AL357033.4-201ENST00000617703 1807 ntBASIC20.23■□□□□ 0.83
WDR49Q8IV35 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 MIR564-202ENST00000385049 94 ntBASIC20.23■□□□□ 0.83
WDR49Q8IV35 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 CROCCP3-202ENST00000420820 1947 ntBASIC20.23■□□□□ 0.83
WDR49Q8IV35 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
WDR49Q8IV35 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WDR49Q8IV35 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 ATP5G1P1-201ENST00000448724 379 ntBASIC20.22■□□□□ 0.83
WDR49Q8IV35 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
WDR49Q8IV35 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.22■□□□□ 0.83
WDR49Q8IV35 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WDR49Q8IV35 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.22■□□□□ 0.83
WDR49Q8IV35 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 AC141257.4-201ENST00000634557 245 ntBASIC20.21■□□□□ 0.83
WDR49Q8IV35 AC136944.6-201ENST00000634818 245 ntBASIC20.21■□□□□ 0.83
WDR49Q8IV35 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
WDR49Q8IV35 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WDR49Q8IV35 TNXA-203ENST00000507684 2038 ntBASIC20.2■□□□□ 0.83
WDR49Q8IV35 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms