Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 FSCN1P1-201ENST00000568912 1481 ntBASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.31
CHD1LQ86WJ1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.31
CHD1LQ86WJ1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 AL357033.4-201ENST00000617703 1807 ntBASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHD1LQ86WJ1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CHD1LQ86WJ1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 RPS2P55-201ENST00000397318 883 ntBASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 AL158047.1-201ENST00000445918 881 ntBASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 AC107956.1-201ENST00000494359 873 ntBASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 AL390961.4-201ENST00000623958 2535 ntBASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHD1LQ86WJ1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 RCC2P3-201ENST00000418112 1537 ntBASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms