Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 EGLN1P1-201ENST00000531623 762 ntBASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 AC012306.2-201ENST00000609350 630 ntBASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 AC006333.2-201ENST00000607957 2099 ntBASIC18.91■□□□□ 0.62
LYSMD3Q7Z3D4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 FAM210CP-201ENST00000445714 574 ntBASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 CCR12P-201ENST00000446203 998 ntBASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 AC116562.4-202ENST00000641738 218 ntBASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 LINC01568-207ENST00000641790 1380 ntBASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 AC092338.2-201ENST00000568827 1415 ntBASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LYSMD3Q7Z3D4 NEFHP1-201ENST00000412845 2629 ntBASIC18.89■□□□□ 0.62
LYSMD3Q7Z3D4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LYSMD3Q7Z3D4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
LYSMD3Q7Z3D4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 AL512353.2-201ENST00000448759 1962 ntBASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LYSMD3Q7Z3D4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AC007663.1-201ENST00000438948 1240 ntBASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 TSPY17P-201ENST00000450329 467 ntBASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AP003041.3-201ENST00000527151 707 ntBASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AL353719.1-201ENST00000566847 864 ntBASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.88■□□□□ 0.61
LYSMD3Q7Z3D4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms