Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 MYCNOS-205ENST00000641950 531 ntBASIC11.94□□□□□ -0.5
LINC00575Q6W349 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 AC096631.2-201ENST00000436136 790 ntBASIC11.93□□□□□ -0.5
LINC00575Q6W349 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 NME1-207ENST00000480143 964 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 RHOF-204ENST00000537265 699 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 UBE2DNL-204ENST00000602536 740 ntBASIC11.93□□□□□ -0.5
LINC00575Q6W349 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 AC106820.2-201ENST00000563775 3264 ntBASIC11.93□□□□□ -0.5
LINC00575Q6W349 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00575Q6W349 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00575Q6W349 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 C2orf69P4-201ENST00000565394 541 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms