Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 AC007613.1-201ENST00000572811 2597 ntBASIC19.21■□□□□ 0.67
CASC4Q6P4E1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASC4Q6P4E1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
CASC4Q6P4E1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 AC005082.1-201ENST00000413042 2259 ntBASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 AC083906.6-201ENST00000641366 219 ntBASIC19.2■□□□□ 0.66
CASC4Q6P4E1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.2■□□□□ 0.66
CASC4Q6P4E1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 AC124016.1-201ENST00000609552 612 ntBASIC19.19■□□□□ 0.66
CASC4Q6P4E1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 KRT8P41-201ENST00000533985 1514 ntBASIC19.19■□□□□ 0.66
CASC4Q6P4E1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
CASC4Q6P4E1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 AC090164.3-201ENST00000610780 2143 ntBASIC19.18■□□□□ 0.66
CASC4Q6P4E1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 ANO7L1-203ENST00000602586 1720 ntBASIC19.18■□□□□ 0.66
CASC4Q6P4E1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 AC006058.3-201ENST00000606217 1069 ntBASIC19.18■□□□□ 0.66
CASC4Q6P4E1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms