Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 SLC25A1P2-201ENST00000430693 912 ntBASIC16.48■□□□□ 0.23
FAM27BQ5VT28 AP000525.1-201ENST00000608286 694 ntBASIC16.48■□□□□ 0.23
FAM27BQ5VT28 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM27BQ5VT28 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM27BQ5VT28 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 TSPY17P-201ENST00000450329 467 ntBASIC16.46■□□□□ 0.23
FAM27BQ5VT28 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 AC093827.2-201ENST00000512654 315 ntBASIC16.46■□□□□ 0.23
FAM27BQ5VT28 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 AL023803.3-201ENST00000615559 522 ntBASIC16.46■□□□□ 0.23
FAM27BQ5VT28 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM27BQ5VT28 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
FAM27BQ5VT28 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FAM27BQ5VT28 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
FAM27BQ5VT28 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
FAM27BQ5VT28 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
FAM27BQ5VT28 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 AL357033.4-201ENST00000617703 1807 ntBASIC16.45■□□□□ 0.22
FAM27BQ5VT28 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 MIR1238-201ENST00000408483 83 ntBASIC16.45■□□□□ 0.22
FAM27BQ5VT28 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 AC066615.1-201ENST00000640911 628 ntBASIC16.45■□□□□ 0.22
FAM27BQ5VT28 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM27BQ5VT28 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms