Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 TSPY21P-201ENST00000433481 731 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AC097658.1-201ENST00000475555 843 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AC083906.2-201ENST00000511578 360 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 PNMA6B-201ENST00000538162 1200 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 MIR4758-201ENST00000577688 71 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AC060766.5-201ENST00000590539 871 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 ANO7L1-203ENST00000602586 1720 ntBASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.03■□□□□ 0.32
LCN1P1Q5VSP4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 CROCCP5-201ENST00000436658 830 ntBASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LCN1P1Q5VSP4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LCN1P1Q5VSP4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 AC120498.8-201ENST00000614275 531 ntBASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LCN1P1Q5VSP4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17■□□□□ 0.31
LCN1P1Q5VSP4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms