Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 AL138781.1-201ENST00000566567 1274 ntBASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH2D4BQ5SQS7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.64■□□□□ 0.58
SH2D4BQ5SQS7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.64■□□□□ 0.58
SH2D4BQ5SQS7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.64■□□□□ 0.58
SH2D4BQ5SQS7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.64■□□□□ 0.58
SH2D4BQ5SQS7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 HLA-L-209ENST00000420110 1011 ntBASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 AC104771.1-201ENST00000603335 964 ntBASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH2D4BQ5SQS7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 AL355802.2-201ENST00000402069 882 ntBASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 MIR4758-201ENST00000577688 71 ntBASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 HLA-B-256ENST00000639848 1089 ntBASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH2D4BQ5SQS7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms