Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDR2Q01850 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDR2Q01850 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.06■□□□□ 0.8
CDR2Q01850 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.06■□□□□ 0.8
CDR2Q01850 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.06■□□□□ 0.8
CDR2Q01850 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.06■□□□□ 0.8
CDR2Q01850 AP001412.1-201ENST00000608405 714 ntBASIC20.06■□□□□ 0.8
CDR2Q01850 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.06■□□□□ 0.8
CDR2Q01850 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDR2Q01850 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDR2Q01850 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR2Q01850 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CDR2Q01850 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR2Q01850 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR2Q01850 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.05■□□□□ 0.8
CDR2Q01850 AC005082.1-201ENST00000413042 2259 ntBASIC20.05■□□□□ 0.8
CDR2Q01850 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.05■□□□□ 0.8
CDR2Q01850 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDR2Q01850 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.05■□□□□ 0.8
CDR2Q01850 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CDR2Q01850 AL049637.2-201ENST00000641778 930 ntBASIC20.05■□□□□ 0.8
CDR2Q01850 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CDR2Q01850 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR2Q01850 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR2Q01850 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.05■□□□□ 0.8
CDR2Q01850 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDR2Q01850 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDR2Q01850 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.04■□□□□ 0.8
CDR2Q01850 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.04■□□□□ 0.8
CDR2Q01850 DGCR10-201ENST00000609839 495 ntBASIC20.04■□□□□ 0.8
CDR2Q01850 AC090164.3-201ENST00000610780 2143 ntBASIC20.04■□□□□ 0.8
CDR2Q01850 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 AC096733.2-201ENST00000609937 1394 ntBASIC20.04■□□□□ 0.8
CDR2Q01850 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR2Q01850 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDR2Q01850 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.04■□□□□ 0.8
CDR2Q01850 NEFHP1-201ENST00000412845 2629 ntBASIC20.04■□□□□ 0.8
CDR2Q01850 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDR2Q01850 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.03■□□□□ 0.8
CDR2Q01850 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.03■□□□□ 0.8
CDR2Q01850 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.03■□□□□ 0.8
CDR2Q01850 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDR2Q01850 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.03■□□□□ 0.8
CDR2Q01850 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.03■□□□□ 0.8
CDR2Q01850 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.03■□□□□ 0.8
CDR2Q01850 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.03■□□□□ 0.8
CDR2Q01850 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CDR2Q01850 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.03■□□□□ 0.8
CDR2Q01850 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDR2Q01850 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDR2Q01850 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms