Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.22■□□□□ 0.35
CDC42P60953 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CDC42P60953 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC42P60953 RPS2P52-201ENST00000469610 820 ntBASIC17.22■□□□□ 0.35
CDC42P60953 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.22■□□□□ 0.35
CDC42P60953 AC087623.3-201ENST00000607047 1098 ntBASIC17.22■□□□□ 0.35
CDC42P60953 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.22■□□□□ 0.35
CDC42P60953 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.22■□□□□ 0.35
CDC42P60953 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDC42P60953 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC42P60953 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDC42P60953 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC42P60953 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.21■□□□□ 0.35
CDC42P60953 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.21■□□□□ 0.35
CDC42P60953 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC42P60953 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDC42P60953 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC42P60953 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.21■□□□□ 0.35
CDC42P60953 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDC42P60953 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CDC42P60953 TSPY21P-201ENST00000433481 731 ntBASIC17.21■□□□□ 0.35
CDC42P60953 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDC42P60953 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.21■□□□□ 0.35
CDC42P60953 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC42P60953 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDC42P60953 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42P60953 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDC42P60953 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.21■□□□□ 0.34
CDC42P60953 AC008764.6-201ENST00000595909 2069 ntBASIC17.2■□□□□ 0.34
CDC42P60953 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDC42P60953 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
CDC42P60953 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.2■□□□□ 0.34
CDC42P60953 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.2■□□□□ 0.34
CDC42P60953 AC006015.1-201ENST00000429970 570 ntBASIC17.2■□□□□ 0.34
CDC42P60953 TUBB8P6-201ENST00000436895 1288 ntBASIC17.2■□□□□ 0.34
CDC42P60953 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.2■□□□□ 0.34
CDC42P60953 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC42P60953 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDC42P60953 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDC42P60953 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42P60953 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CDC42P60953 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDC42P60953 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC42P60953 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDC42P60953 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC42P60953 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.19■□□□□ 0.34
CDC42P60953 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
CDC42P60953 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42P60953 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms