Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PAX9P55771 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX9P55771 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PAX9P55771 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX9P55771 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.12■□□□□ 0.01
PAX9P55771 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PAX9P55771 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PAX9P55771 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.11■□□□□ 0.01
PAX9P55771 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.11■□□□□ 0.01
PAX9P55771 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PAX9P55771 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.11■□□□□ 0.01
PAX9P55771 RAP2CP1-201ENST00000605103 478 ntBASIC15.11■□□□□ 0.01
PAX9P55771 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.11■□□□□ 0.01
PAX9P55771 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PAX9P55771 AC093677.2-201ENST00000600169 1863 ntBASIC15.11■□□□□ 0.01
PAX9P55771 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PAX9P55771 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.11■□□□□ 0.01
PAX9P55771 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.11■□□□□ 0.01
PAX9P55771 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.11■□□□□ 0.01
PAX9P55771 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.11■□□□□ 0.01
PAX9P55771 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 RCC2P6-201ENST00000526625 1557 ntBASIC15.11■□□□□ 0.01
PAX9P55771 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PAX9P55771 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PAX9P55771 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.1■□□□□ 0.01
PAX9P55771 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PAX9P55771 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PAX9P55771 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PAX9P55771 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PAX9P55771 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.1■□□□□ 0.01
PAX9P55771 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
PAX9P55771 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.1■□□□□ 0.01
PAX9P55771 AC133552.2-202ENST00000575694 574 ntBASIC15.1■□□□□ 0.01
PAX9P55771 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.1■□□□□ 0.01
PAX9P55771 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.1■□□□□ 0.01
PAX9P55771 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PAX9P55771 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 AC138028.4-201ENST00000564984 1845 ntBASIC15.1■□□□□ 0.01
PAX9P55771 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PAX9P55771 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PAX9P55771 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PAX9P55771 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PAX9P55771 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PAX9P55771 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.09■□□□□ 0.01
PAX9P55771 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PAX9P55771 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PAX9P55771 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PAX9P55771 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PAX9P55771 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PAX9P55771 MIR935-201ENST00000401179 91 ntBASIC15.09■□□□□ 0.01
PAX9P55771 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.09■□□□□ 0.01
PAX9P55771 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.09■□□□□ 0.01
PAX9P55771 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.09■□□□□ 0.01
PAX9P55771 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PAX9P55771 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PAX9P55771 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.09■□□□□ 0.01
PAX9P55771 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PAX9P55771 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.09■□□□□ 0.01
PAX9P55771 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PAX9P55771 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.08■□□□□ 0.01
PAX9P55771 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
PAX9P55771 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PAX9P55771 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PAX9P55771 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.08■□□□□ 0.01
PAX9P55771 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PAX9P55771 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms