Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN5P54829 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN5P54829 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN5P54829 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN5P54829 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN5P54829 KRT18P31-201ENST00000506277 1292 ntBASIC19.44■□□□□ 0.7
PTPN5P54829 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN5P54829 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN5P54829 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN5P54829 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN5P54829 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTPN5P54829 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN5P54829 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN5P54829 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN5P54829 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTPN5P54829 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PTPN5P54829 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN5P54829 KRT18P58-201ENST00000527480 1120 ntBASIC19.43■□□□□ 0.7
PTPN5P54829 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN5P54829 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.43■□□□□ 0.7
PTPN5P54829 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN5P54829 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN5P54829 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN5P54829 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN5P54829 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN5P54829 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN5P54829 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN5P54829 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN5P54829 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN5P54829 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PTPN5P54829 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN5P54829 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN5P54829 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN5P54829 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN5P54829 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN5P54829 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN5P54829 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.42■□□□□ 0.7
PTPN5P54829 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.42■□□□□ 0.7
PTPN5P54829 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN5P54829 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN5P54829 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN5P54829 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTPN5P54829 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN5P54829 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN5P54829 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN5P54829 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN5P54829 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PTPN5P54829 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN5P54829 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.41■□□□□ 0.7
PTPN5P54829 CHCHD2P8-201ENST00000429873 447 ntBASIC19.41■□□□□ 0.7
PTPN5P54829 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN5P54829 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN5P54829 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN5P54829 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN5P54829 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTPN5P54829 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PTPN5P54829 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN5P54829 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN5P54829 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN5P54829 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN5P54829 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN5P54829 PCDHAC2-203ENST00000615316 3011 ntBASIC19.4■□□□□ 0.7
PTPN5P54829 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN5P54829 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN5P54829 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN5P54829 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN5P54829 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms