Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.4■□□□□ 0.7
COPAP53621 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
COPAP53621 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COPAP53621 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.4■□□□□ 0.7
COPAP53621 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COPAP53621 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
COPAP53621 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
COPAP53621 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.4■□□□□ 0.7
COPAP53621 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPAP53621 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPAP53621 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPAP53621 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COPAP53621 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
COPAP53621 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
COPAP53621 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.39■□□□□ 0.69
COPAP53621 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.39■□□□□ 0.69
COPAP53621 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.39■□□□□ 0.69
COPAP53621 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COPAP53621 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.39■□□□□ 0.69
COPAP53621 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.39■□□□□ 0.69
COPAP53621 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COPAP53621 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.39■□□□□ 0.69
COPAP53621 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.39■□□□□ 0.69
COPAP53621 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.39■□□□□ 0.69
COPAP53621 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPAP53621 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COPAP53621 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.38■□□□□ 0.69
COPAP53621 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.38■□□□□ 0.69
COPAP53621 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
COPAP53621 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.38■□□□□ 0.69
COPAP53621 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.38■□□□□ 0.69
COPAP53621 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.38■□□□□ 0.69
COPAP53621 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.38■□□□□ 0.69
COPAP53621 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.38■□□□□ 0.69
COPAP53621 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
COPAP53621 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
COPAP53621 AC141257.4-201ENST00000634557 245 ntBASIC19.38■□□□□ 0.69
COPAP53621 AC136944.6-201ENST00000634818 245 ntBASIC19.38■□□□□ 0.69
COPAP53621 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.38■□□□□ 0.69
COPAP53621 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPAP53621 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.37■□□□□ 0.69
COPAP53621 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.37■□□□□ 0.69
COPAP53621 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
COPAP53621 FAM8A6P-201ENST00000407496 1135 ntBASIC19.37■□□□□ 0.69
COPAP53621 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 YBX1P2-201ENST00000489612 999 ntBASIC19.37■□□□□ 0.69
COPAP53621 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms