Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LBX1P52954 AP002414.3-201ENST00000589352 1468 ntBASIC21.27■■□□□ 1
LBX1P52954 TP73-AS1-210ENST00000637775 1455 ntBASIC21.27■■□□□ 1
LBX1P52954 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.27■■□□□ 1
LBX1P52954 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
LBX1P52954 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.27■■□□□ 1
LBX1P52954 AL024507.2-201ENST00000606070 2574 ntBASIC21.27■■□□□ 1
LBX1P52954 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LBX1P52954 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.27■■□□□ 1
LBX1P52954 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.27■■□□□ 1
LBX1P52954 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.27■■□□□ 1
LBX1P52954 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.27■■□□□ 1
LBX1P52954 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.27■■□□□ 1
LBX1P52954 AC015922.1-201ENST00000421102 1152 ntBASIC21.27■■□□□ 1
LBX1P52954 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.27■■□□□ 1
LBX1P52954 AC009947.1-201ENST00000444350 727 ntBASIC21.27■■□□□ 1
LBX1P52954 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.27■■□□□ 1
LBX1P52954 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
LBX1P52954 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.27■■□□□ 1
LBX1P52954 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.27■■□□□ 1
LBX1P52954 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.27■■□□□ 1
LBX1P52954 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.27■■□□□ 1
LBX1P52954 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LBX1P52954 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.27■■□□□ 1
LBX1P52954 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LBX1P52954 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.27■□□□□ 0.99
LBX1P52954 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LBX1P52954 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LBX1P52954 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.26■□□□□ 0.99
LBX1P52954 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.26■□□□□ 0.99
LBX1P52954 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.26■□□□□ 0.99
LBX1P52954 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.26■□□□□ 0.99
LBX1P52954 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.26■□□□□ 0.99
LBX1P52954 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.26■□□□□ 0.99
LBX1P52954 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.26■□□□□ 0.99
LBX1P52954 AC064836.3-201ENST00000607928 673 ntBASIC21.26■□□□□ 0.99
LBX1P52954 AC093512.1-201ENST00000617969 520 ntBASIC21.26■□□□□ 0.99
LBX1P52954 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.26■□□□□ 0.99
LBX1P52954 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
LBX1P52954 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LBX1P52954 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LBX1P52954 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LBX1P52954 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.25■□□□□ 0.99
LBX1P52954 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LBX1P52954 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LBX1P52954 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LBX1P52954 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.25■□□□□ 0.99
LBX1P52954 KRT8P7-201ENST00000533003 1432 ntBASIC21.25■□□□□ 0.99
LBX1P52954 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LBX1P52954 AC025062.2-201ENST00000605477 670 ntBASIC21.25■□□□□ 0.99
LBX1P52954 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.25■□□□□ 0.99
LBX1P52954 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.25■□□□□ 0.99
LBX1P52954 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.25■□□□□ 0.99
LBX1P52954 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.25■□□□□ 0.99
LBX1P52954 AC092720.2-201ENST00000602388 1665 ntBASIC21.24■□□□□ 0.99
LBX1P52954 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LBX1P52954 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.24■□□□□ 0.99
LBX1P52954 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.24■□□□□ 0.99
LBX1P52954 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LBX1P52954 AL162377.1-201ENST00000618844 1793 ntBASIC21.24■□□□□ 0.99
LBX1P52954 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LBX1P52954 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LBX1P52954 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LBX1P52954 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.24■□□□□ 0.99
LBX1P52954 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.24■□□□□ 0.99
LBX1P52954 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LBX1P52954 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LBX1P52954 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.23■□□□□ 0.99
LBX1P52954 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LBX1P52954 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LBX1P52954 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LBX1P52954 AP005117.1-201ENST00000584346 1413 ntBASIC21.23■□□□□ 0.99
LBX1P52954 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LBX1P52954 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LBX1P52954 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.23■□□□□ 0.99
LBX1P52954 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.23■□□□□ 0.99
LBX1P52954 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.23■□□□□ 0.99
LBX1P52954 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.23■□□□□ 0.99
LBX1P52954 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.23■□□□□ 0.99
LBX1P52954 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LBX1P52954 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
LBX1P52954 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms