Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMSP52788 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMSP52788 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 AL049812.1-201ENST00000432563 2267 ntBASIC17.63■□□□□ 0.41
SMSP52788 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMSP52788 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SMSP52788 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SMSP52788 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.62■□□□□ 0.41
SMSP52788 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SMSP52788 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.62■□□□□ 0.41
SMSP52788 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.62■□□□□ 0.41
SMSP52788 LIN28AP1-201ENST00000429574 405 ntBASIC17.62■□□□□ 0.41
SMSP52788 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.62■□□□□ 0.41
SMSP52788 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
SMSP52788 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.62■□□□□ 0.41
SMSP52788 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.62■□□□□ 0.41
SMSP52788 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.62■□□□□ 0.41
SMSP52788 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.62■□□□□ 0.41
SMSP52788 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
SMSP52788 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.62■□□□□ 0.41
SMSP52788 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMSP52788 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMSP52788 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.62■□□□□ 0.41
SMSP52788 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.61■□□□□ 0.41
SMSP52788 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SMSP52788 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SMSP52788 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.61■□□□□ 0.41
SMSP52788 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.61■□□□□ 0.41
SMSP52788 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 TERF1P1-201ENST00000311003 1181 ntBASIC17.61■□□□□ 0.41
SMSP52788 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.61■□□□□ 0.41
SMSP52788 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
SMSP52788 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.61■□□□□ 0.41
SMSP52788 SLC25A3P1-201ENST00000443844 931 ntBASIC17.61■□□□□ 0.41
SMSP52788 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.61■□□□□ 0.41
SMSP52788 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.61■□□□□ 0.41
SMSP52788 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.61■□□□□ 0.41
SMSP52788 AL031985.4-201ENST00000642138 673 ntBASIC17.61■□□□□ 0.41
SMSP52788 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMSP52788 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SMSP52788 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SMSP52788 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMSP52788 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.61■□□□□ 0.41
SMSP52788 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.61■□□□□ 0.41
SMSP52788 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SMSP52788 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.6■□□□□ 0.41
SMSP52788 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SMSP52788 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
SMSP52788 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.6■□□□□ 0.41
SMSP52788 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMSP52788 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.6■□□□□ 0.41
SMSP52788 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.6■□□□□ 0.41
SMSP52788 AL390955.1-201ENST00000428694 934 ntBASIC17.6■□□□□ 0.41
SMSP52788 ATP5G1P1-201ENST00000448724 379 ntBASIC17.6■□□□□ 0.41
SMSP52788 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms