Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC9A3P48764 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC9A3P48764 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 AP003097.1-201ENST00000530657 1135 ntBASIC17.26■□□□□ 0.35
SLC9A3P48764 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 AC008403.3-201ENST00000598924 454 ntBASIC17.26■□□□□ 0.35
SLC9A3P48764 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 HLA-A-209ENST00000638375 975 ntBASIC17.26■□□□□ 0.35
SLC9A3P48764 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC9A3P48764 AP000997.3-201ENST00000623333 2250 ntBASIC17.26■□□□□ 0.35
SLC9A3P48764 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC9A3P48764 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SLC9A3P48764 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC9A3P48764 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC9A3P48764 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC9A3P48764 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC9A3P48764 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC9A3P48764 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC9A3P48764 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC9A3P48764 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 BICD1-207ENST00000551848 1962 ntBASIC17.25■□□□□ 0.35
SLC9A3P48764 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SLC9A3P48764 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SLC9A3P48764 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SLC9A3P48764 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC9A3P48764 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC9A3P48764 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC9A3P48764 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC9A3P48764 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 HLA-L-209ENST00000420110 1011 ntBASIC17.24■□□□□ 0.35
SLC9A3P48764 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC9A3P48764 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC9A3P48764 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.24■□□□□ 0.35
SLC9A3P48764 MTDHP1-201ENST00000605323 784 ntBASIC17.24■□□□□ 0.35
SLC9A3P48764 AC083906.6-201ENST00000641366 219 ntBASIC17.24■□□□□ 0.35
SLC9A3P48764 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SLC9A3P48764 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 AL354751.1-201ENST00000412768 1863 ntBASIC17.24■□□□□ 0.35
SLC9A3P48764 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC9A3P48764 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC9A3P48764 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC9A3P48764 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
SLC9A3P48764 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC9A3P48764 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC9A3P48764 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms