Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.02□□□□□ -0.33
PCP4P48539 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.02□□□□□ -0.33
PCP4P48539 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PCP4P48539 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.02□□□□□ -0.33
PCP4P48539 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCP4P48539 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.01□□□□□ -0.33
PCP4P48539 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
PCP4P48539 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
PCP4P48539 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
PCP4P48539 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PCP4P48539 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.01□□□□□ -0.33
PCP4P48539 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.01□□□□□ -0.33
PCP4P48539 AC007191.1-201ENST00000623179 2995 ntBASIC13.01□□□□□ -0.33
PCP4P48539 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 FLJ16779-201ENST00000612722 7638 ntBASIC13.01□□□□□ -0.33
PCP4P48539 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PCP4P48539 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.01□□□□□ -0.33
PCP4P48539 AC087742.1-201ENST00000575880 1738 ntBASIC13.01□□□□□ -0.33
PCP4P48539 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.01□□□□□ -0.33
PCP4P48539 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PCP4P48539 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCP4P48539 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13□□□□□ -0.33
PCP4P48539 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13□□□□□ -0.33
PCP4P48539 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PCP4P48539 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PCP4P48539 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC13□□□□□ -0.33
PCP4P48539 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PCP4P48539 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PCP4P48539 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
PCP4P48539 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13□□□□□ -0.33
PCP4P48539 AC134043.2-201ENST00000624206 2238 ntBASIC13□□□□□ -0.33
PCP4P48539 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PCP4P48539 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PCP4P48539 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PCP4P48539 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PCP4P48539 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms